structRFM: structure-guided RNA foundation model trained on 21M pairs lands in Nature

EricTopol · x · 2026-11-05

Eric Topol highlights a new Nature paper on structRFM, an RNA foundation model extending the sequence-to-structure paradigm beyond proteins. It is pre-trained on 21M RNA sequence-structure pairs, integrating base-pairing interactions into masked language modeling via a pair-matching operation, plus MUSES (a multi-source ensemble of secondary structures to reduce predictor bias) and a dynamic masking ratio. The authors argue prior RNA models rely on noisy annotations or task-specific objectives that hurt generalizability.

Original post →

More from Research

Research channel →