Stanford's ProteoCraft hits 82.9% experimental hit rate on PD-L1 protein design

Lianhuiq · x · 2026-11-04

Stanford researchers unveiled ProteoCraft, a tree-search-based approach to hallucination-driven protein design. Experimental results: 29/35 designed PD-L1 miniproteins bound successfully (82.9% hit rate, 100% expression success), with a best measured SPR KD of 0.879 nM (best fitted 1.15 nM). Weaker results on IFNAR2: 16.7% hit rate for miniproteins (best KD 359 nM) and 40% for VHHs (best KD 157 nM). The strong low-nanomolar binding on PD-L1 highlights the promise of combining tree search with generative models for computational protein design.

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