CT-Perturb: LLMs Reach 82% of Full-Data Cell Perturbation Prediction with 10% of Measurements

david_van_dijk · x · 2026-11-03

CellType reports that CT-Perturb, a language-model approach for predicting cell responses to perturbations, achieves 82% of its full-data adaptation score on two new cell lines using just 10% of measurements (69% at 1%, 91% at 50%), far above an additive baseline (0.26). The result suggests LLMs can extrapolate perturbation responses to unseen cell contexts from sparse measurements, cutting functional genomics experiment costs.

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