Observational benchmark gains poorly correlate with variant effect prediction

jmschreiber91 · x · 2026-10-30

Joachim Schreiber adds an empirical observation: in several cases, improvements on observational holdouts correlate poorly with variant effect prediction, even for short-range models. He suspects this relates to Muntakim Rafi's homology leakage paper but hasn't fully deciphered the connection yet.

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