UMAP 0.6 docs: how to embed million-scale datasets, tuned via 3M arXiv papers

leland_mcinnes · x · 2026-11-11

UMAP 0.6 ships a large-scale tutorial embedding all 3.07M arXiv papers (title+abstract embedded as 4096-dim vectors by F2LLM-v2 8B). It covers the parts that matter at million scale: nearest-neighbor search, embedding initialization, the layout optimizer, repulsionstrength, and hard negative sampling — and why the new pipeline (compatibilitylayout=False) suits very large datasets. Timings on a 64-core, 500GB RAM machine.

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