Mola: sequence-to-distribution framework models single-molecule chromatin states

anshulkundaje · x · 2026-11-06

A University of Chicago team (Jian Zhou's group) posted a bioRxiv preprint introducing a sequence-to-distribution (S2d) framework that models the full probabilistic distribution of single-molecule chromatin states from DNA sequence alone, training a model called Mola. Unlike population-average deep learning models, Mola captures single-molecule heterogeneity and dynamics; the authors use it to quantify sequence-driven nucleosome regulation and reveal distinct modes of transcription factor engagement with nucleosomes.

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