BioEmu2 simulates peptide folding & binding in 40 GPU-minutes vs 10+ GPU-years for MD — 100,000x speedup

FrankNoeBerlin · x · 2026-10-20

Frank Noe's team demonstrates BioEmu2 simulating the dynamics of an intrinsically disordered peptide folding and binding to its protein receptor via an intermediate state.

The same 5-millisecond simulation would take over 10 GPU-years with conventional MD simulation; BioEmu2 needs just 40 minutes on a single GPU at 5-microsecond steps — a >100,000x speedup.

Related event: Microsoft Open-Sources BioEmu2, Claiming 100,000x Speedup in Biomolecular Dynamics(15 posts)→

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